Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

Nam48020

ナレッジベース

Guides researchers through structured ideation frameworks to discover high-impact research directions. Use when exploring new problem spaces, pivoting between projects, or seeking novel angles on existing work.

endman1000

ラボツール

Experiment Design

This skill should be used when the user asks to "design experiments", "plan experiments", "how many runs do I need", "which baselines should I use", "plan ablations", "power analysis", "how many seeds", or after hypothesis formulation and before running any experiments. Pre-experiment planning with baselines, ablations, sample size, resource estimation, and execution ordering.

EmaRimoldi0

CLI ツール

Design Experiments

Slash-command shim for /design-experiments. Delegates to commands/design-experiments.md; use when the client resolves this command via the Skill tool.

EmaRimoldi0

デバッグ

Autonomous Research

ML research loop supporting both fully autonomous and collaborative (human-runs-training, agent-analyzes) modes. Conducts literature review, proposes architecture changes, implements code behind flags, diagnoses results, hunts bugs in measurement pipelines, designs isolation experiments, and iterates. Use when: you want systematic research on a model — from architecture audit through implementation, experimentation, and evidence-driven pivots.

elerson0

営業・マーケティング

Idea Discovery

Workflow 1: Full idea discovery pipeline. Orchestrates research-lit → idea-creator → novelty-check → research-review to go from a broad research direction to validated, pilot-tested ideas. Use when user says "找idea全流程", "idea discovery pipeline", "从零开始找方向", or wants the complete idea exploration workflow.

dz3062710980

デバッグ

Ieee Search Mcp

Use browser MCP to access IEEE Xplore through university library proxy, preserve institutional session, run keyword/advanced/journal search, and optionally post-filter by CCF rank (for example CCF-A) with structured output.

DURUII0

学術

Review

Use when a draft, paper, or paper-like report is substantial enough for an independent skeptical audit before finalization, rebuttal, or revision routing.

dukeke-cloud0

テスト

Rebuttal

Use when a quest already has a paper, draft, or review package and the task is to map reviewer feedback into experiments, manuscript deltas, and a durable rebuttal / revision response.

dukeke-cloud0

バイオインフォマティクス

Lifesciences Crispr

Validates synthetic lethality claims from CRISPR knockout screens using BioGRID ORCS 5-phase workflow. This skill should be used when the user asks to "validate synthetic lethality", "query CRISPR essentiality data", "find gene dependencies", "compare cell line screens", or mentions BioGRID ORCS, gene knockout data, essentiality scores (CERES, MAGeCK, BAGEL), or asks to validate claims from published CRISPR papers.

donbr0

科学計算

Nuclearstructure

Expertise in analyzing the impact of nuclear structure on radiation-induced DNA damage and the formation of lethal lesions, utilizing advanced genomic sequencing techniques.

docxology0

データエンジニアリング

Scientific Method

Use when a plan, decision, review, or research thread needs explicit hypotheses, evidence quality, measurement, or experiment design.

dnvt0

学術

Skill: full-text literature synthesis

Use this skill when the user wants questions that feel like paper-reading, literature review, recent findings, or 'you have to open the paper, not just the abstract'. Trigger it for requests like 'make it retrieve scientific papers', 'ask about a new result from the literature', 'force source-backed answering', or 'reward saying unsure when the paper isn't enough'. This skill is for bounded scientific corpora and full-text evidence use.

Dingxingdi0

デバッグ

Experiment Extraction

Use when user says "process experiment", "处理实验" (process experiment), "处理 experience" (process experience), or points to a Type=Experiment/Experience entry. Extracts learnings from experiments through Raw → Fleeting → Structured → Permanent.

desmondloh980

コード品質

Peer Reviewer

Checks a completed research item for logical coherence, alternative explanations, and cross-item integration. Use after research investigation is complete and before the item is marked done. Audit-only — never edits the item.

davidamitchell0

バイオインフォマティクス