Occupations

Biochemists and Biophysicists

2,070 skills

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2,070 skills

Binding Site Characterization

Binding Site Characterization - Characterize binding sites: predict pockets with fpocket and P2Rank, get binding site info from ChEMBL, and visualize. Use this skill for structural biology tasks involving run fpocket pred pocket prank get binding site by id visualize protein. Combines 4 tools from 3 SCP server(s).

SpectrAI-Initiative375

Machine Learning

Protein Engineering

Protein Engineering Workflow - Engineer a protein: predict structure, identify functional residues, predict beneficial mutations, and calculate properties. Use this skill for protein engineering tasks involving Protein structure prediction ESMFold predict functional residue zero shot sequence prediction calculate protein sequence properties. Combines 4 tools from 2 SCP server(s).

SpectrAI-Initiative375

Bioinformatics

Kegg Gene Search

Search KEGG database for gene information to retrieve pathway associations, functional annotations, and disease links.

SpectrAI-Initiative375

Debugging

Proteome Analysis

Proteome-Level Analysis - Analyze at proteome level: get proteome from UniProt, gene-centric view, functional annotation from STRING. Use this skill for proteomics tasks involving get proteome by id get gene centric by proteome get functional annotation. Combines 3 tools from 2 SCP server(s).

SpectrAI-Initiative375

Bioinformatics

Protein Database Crossref

Protein Cross-Database Reference - Cross-reference protein: UniProt entry, NCBI gene, Ensembl xrefs, and PDB structure search. Use this skill for proteomics tasks involving get uniprotkb entry by accession get gene metadata by gene name get xrefs symbol retrieve protein data by pdbcode. Combines 4 tools from 4 SCP server(s).

SpectrAI-Initiative375

Biochemists and Biophysicists

Binding Site Characterization

Protein Engineering

Kegg Gene Search

Proteome Analysis

Protein Database Crossref

Biochemists and Biophysicists

Binding Site Characterization

Protein Engineering

Kegg Gene Search

Proteome Analysis

Protein Database Crossref

Scientific Literature Search

Drugsda Prosst

Protein Function Annotation

Protein Classification Analysis

Protein Blast Search

String Ppi Enrichment

Drug Target Structure

Uniprot Protein Retrieval

Protein Drug Interaction

Protein Solubility Optimization

Enzyme Engineering

Molecular Docking Pipeline

Uniprot Deep Analysis

Full Protein Analysis

Protein Similarity Search

Web Literature Mining

Drugsda Esmfold

Drugsda Target Retrieve

Drugsda P2rank

Protein Structure Comprehensive Analysis

Disease Protein Profiling

Drugsda Peptide Sampling

Protein Properties Calculation

Alphafold Structure Pipeline

Antibody Target Analysis