Check if referenced bioinformatics software/code licenses allow commercial use (GPL vs MIT, etc.).
Check if referenced bioinformatics software/code licenses allow commercial use (GPL vs MIT, etc.).
scripts/main.py.references/ for task-specific guidance.See ## Prerequisites above for related details.
Python: 3.10+. Repository baseline for current packaged skills.Third-party packages: not explicitly version-pinned in this skill package. Add pinned versions if this skill needs stricter environment control.See ## Usage above for related details.
cd "20260318/scientific-skills/Evidence Insight/open-source-license-check"
python -m py_compile scripts/main.py
python scripts/main.py --help
Example run plan:
CONFIG block or documented parameters if the script uses fixed settings.python scripts/main.py with the validated inputs.See ## Workflow above for related details.
scripts/main.py.references/ contains supporting rules, prompts, or checklists.Use this command to verify that the packaged script entry point can be parsed before deeper execution.
python -m py_compile scripts/main.py
Use these concrete commands for validation. They are intentionally self-contained and avoid placeholder paths.
python -m py_compile scripts/main.py
python scripts/main.py --help
python scripts/main.py --software "samtools,bwa,bedtools"
python scripts/main.py --check-requirements requirements.txt
--software: Comma-separated software names--check-requirements: Check Python requirements file--check-directory: Scan directory for license files| License | Commercial Use | Notes |
|---|---|---|
| MIT | ✅ Yes | Permissive |
| Apache-2.0 | ✅ Yes | Permissive |
| BSD | ✅ Yes | Permissive |
| GPL-3.0 | ⚠️ Copyleft | Must open source derivative |
| GPL-2.0 | ⚠️ Copyleft | Must open source derivative |
| AGPL | ❌ No | Network use is distribution |
| Risk Indicator | Assessment | Level |
|---|---|---|
| Code Execution | Python/R scripts executed locally | Medium |
| Network Access | No external API calls | Low |
| File System Access | Read input files, write output files | Medium |
| Instruction Tampering | Standard prompt guidelines | Low |
| Data Exposure | Output files saved to workspace | Low |
No additional Python packages required.
Every final response should make these items explicit when they are relevant:
scripts/main.py fails, report the failure point, summarize what still can be completed safely, and provide a manual fallback.This skill accepts requests that match the documented purpose of open-source-license-check and include enough context to complete the workflow safely.
Do not continue the workflow when the request is out of scope, missing a critical input, or would require unsupported assumptions. Instead respond:
open-source-license-checkonly handles its documented workflow. Please provide the missing required inputs or switch to a more suitable skill.
Use the following fixed structure for non-trivial requests:
If the request is simple, you may compress the structure, but still keep assumptions and limits explicit when they affect correctness.