Submit compact BioStudies and ArrayExpress API requests for free-text search and accession-based study retrieval. Use when a user wants concise BioStudies summaries
scripts/rest_request.py for all BioStudies and ArrayExpress calls.base_url=https://www.ebi.ac.uk/biostudies/api/v1.pageSize=10 and max_items=10; accession lookups usually do not need max_items.... in tool previews as UI truncation, not literal request content.search, ArrayExpress/search, studies/<accession>, and studies/<accession>/info.save_raw=true and report the saved file path instead of pasting large study records into chat.base_url, pathmethod, params, headers, json_body, form_body, record_path, response_format, max_items, max_depth, timeout_sec, save_raw, raw_output_path{"base_url":"https://www.ebi.ac.uk/biostudies/api/v1","path":"search","params":{"query":"rna","page":1,"pageSize":10},"record_path":"hits","max_items":10}{"base_url":"https://www.ebi.ac.uk/biostudies/api/v1","path":"ArrayExpress/search","params":{"query":"single cell","page":1,"pageSize":10},"record_path":"hits","max_items":10}{"base_url":"https://www.ebi.ac.uk/biostudies/api/v1","path":"studies/E-MTAB-6701"}ok, source, path, method, status_code, warnings, and either compact records or a compact summary.raw_output_path when save_raw=true.ok=false with error.code and error.message.echo '{"base_url":"https://www.ebi.ac.uk/biostudies/api/v1","path":"search","params":{"query":"rna","page":1,"pageSize":10},"record_path":"hits","max_items":10}' | python scripts/rest_request.py
scripts/rest_request.py.