Cell type annotation of spatial transcriptomics data using marker gene databases or reference single-cell datasets. Input: --input <domains.h5ad> [--reference <sc.h5ad>] --output <dir>. Output: annotated.h5ad, annotation_plot.png, cell_type_fractions.csv.
4a:I[156109,["/_next/static/chunks/1ea676ef2e44e1bd.js","/_next/static/chunks/21b8487538aeadd3.js","/_next/static/chunks/58856f3c93d9952b.js","/_next/static/chunks/5cc3756252287353.js","/_next/static/chunks/ba0e06e0e59299fb.js","/_next/static/chunks/913b07982cbab33c.js","/_next/static/chunks/5ca7a7a859273205.js","/_next/static/chunks/7184f6b0e1c632b0.js","/_next/static/chunks/1515af12cffe874c.js","/_next/static/chunks/a059dc0d9861ae6c.js","/_next/static/chunks/04fd90a36a4ade2e.js","/_next/static/chunks/a04653835f25a194.js","/_next/static/chunks/5c2fc0019a205c61.js","/_next/static/chunks/0746c2ed8497fe03.js"],"SkillRelatedList"]