Templates, directory structure, and sync rules for writing research logs and updating README
research/
├── CLAUDE.md ← operating rules (auto-loaded each session)
├── README.md ← research status summary (shown on GitHub)
├── logs/
│ ├── YYYY-MM-DD/ ← daily log folder (current week)
│ │ ├── log.md ← Deep-Dive research log
│ │ └── *.png/jpg ← experiment result visualizations
│ └── archive/
│ └── MMDD~MMDD/ ← weekly folder (contains daily folders)
├── summaries/ ← weekly (week-MMDD~MMDD.md) / monthly summaries
├── topics/ ← topic-specific cumulative notes
│ └── <topic>/
│ ├── architecture_<topic>.md ← current best specification
│ ├── experiment_log.md ← architecture changelog
│ ├── log.md ← module-specific cumulative log
│ └── discussion/ ← in-depth topic discussion docs
└── related_work/ ← related papers/techniques
=============================================================================
[Deep-Dive Research Log]
Context Header: YYYY-MM-DD / main topics
=============================================================================
■ Current Objectives
- Today's discussion goals and specific bottlenecks to resolve
■ The 'Missing' Details (Trials & Failures)
- Ideas discussed but not adopted, with specific rejection reasons
- Excluded variables and technical rationale
- Unresolved questions
■ Confirmed Decisions
- Finalized algorithms, model structures, formulas, parameters, hard constraints
■ Architecture Update (if applicable)
- Changed inputs/outputs, new layers/modules, loss, config, etc.
- ASCII Art architecture diagram
■ Technical Artifacts
- Key formulas (KaTeX: $$...$$ block, $...$ inline)
- Key code snippets
■ Experiment Results (if applicable)
- Training curves, metric trends, visualization results
- Images: saved in same folder, referenced by relative path 
■ Future Directions
- Priority To-Do items to tackle first in tomorrow's session
# <module name> — Progress Log
## YYYY-MM-DD
### Topic / one-line summary
- Discussion content, decisions, experiment results
- Rejected ideas and reasons (if any)
- Related metrics, formulas, code snippets
## YYYY-MM-DD
...
git add -A && git commit && git push)