Detect, classify, and QC viral contigs.
Detect, classify, and QC viral contigs.
| Task | Action |
|---|---|
| Run workflow | Follow the steps in this skill and capture outputs. |
| Validate inputs | Confirm required inputs and reference data exist. |
| Review outputs | Inspect reports and QC gates before proceeding. |
| Tool docs | See docs/README.md. |
| References | - See ../bio-skills-references.md |
Prerequisites:
docs/README.mdBIO_DB_ROOT (default /media/shared-expansion/db/ on WSU).contigs.fasta
Issue: Missing inputs or reference databases Solution: Verify paths and permissions before running the workflow.
Issue: Low-quality results or failed QC gates Solution: Review reports, adjust parameters, and re-run the affected step.32:["$","$L39",null,{"content":"$3a","frontMatter":{"name":"bio-viromics","description":"Detect, classify, and QC viral contigs."}}]