Full DeepScientist research pipeline: scout → baseline → idea → experiment → analysis → optimize → write → review → finalize. End-to-end autonomous research lifecycle.
End-to-end autonomous research workflow for: $ARGUMENTS
This skill chains all DeepScientist research stages into a single pipeline:
/ds-scout → /ds-baseline → /ds-idea → /ds-experiment → /ds-analysis-campaign → /ds-optimize → /ds-write → /ds-review → /ds-finalize
Frame the research problem, survey literature, identify datasets/metrics, discover existing baselines.
/ds-scout "$ARGUMENTS"
Output: Problem framing, literature map, baseline shortlist, evaluation contract.
Present the research landscape to the user. Wait for confirmation before proceeding.
Reproduce or import the most relevant baseline from Stage 1's shortlist.
/ds-baseline
Output: Working baseline with verified metrics, comparability contract.
Generate concrete research hypotheses based on the literature gaps and baseline analysis.
/ds-idea
Output: Ranked candidate ideas with selection rationale.
🚦 Gate 2: Present top ideas to the user. Wait for confirmation of which idea to pursue.
Implement and run the main experiment for the selected idea.
/ds-experiment
Output: Experiment code, results, evidence artifacts.
Run follow-up experiments: ablations, robustness checks, error analysis.
/ds-analysis-campaign
Output: Ablation results, robustness data, writing-facing evidence slices.
If results are promising but not yet strong enough, run algorithm-first iterative improvement.
/ds-optimize
Skip this stage if main experiment results already meet the success criteria.
Draft the paper from accepted evidence.
/ds-write
Output: LaTeX paper draft with figures and references.
Run an independent skeptical audit of the draft.
/ds-review
Output: Review report with severity-graded feedback.
If review identifies critical issues → fix and re-review (max 2 rounds).
Consolidate final claims, limitations, and recommendations.
/ds-finalize
Output: Final paper, summary state, resume packet.
| Stage | Duration | Autonomous? |
|---|---|---|
| 1. Scout | 20-40 min | Wait for Gate 1 |
| 2. Baseline | 15-60 min | Yes |
| 3. Idea | 15-30 min | Wait for Gate 2 |
| 4. Experiment | 30 min - hours | Yes |
| 5. Analysis | 30-60 min | Yes |
| 6. Optimize | 0-60 min | Yes (optional) |
| 7. Write | 30-60 min | Yes |
| 8. Review | 15-30 min | Yes |
| 9. Finalize | 10-20 min | Yes |