Use the local RNA literature MCP server to find new papers on RNA therapeutics or suppressor tRNA design, summarize high-signal findings, cross-reference the experimental database, and produce a concise research note.
Use this skill when the user wants a focused literature update around RNA therapeutics, suppressor tRNA design, nonsense suppression, engineered RNAs, RNA structure, or nearby bioinformatics topics.
If the user also provides a Notion page or says to save the results in Notion, use the Notion MCP after the literature search is complete.
The rna-literature MCP server must already be registered and reachable from Codex.
Start with search_papers.
Use a focused query around the user’s topic.
If the user asked for recent work but gave no dates, default to the last 30 days.
Prefer pubmed first; add crossref or arxiv only when broader recall is useful.
Rank for signal, not volume.
Prioritize papers from PubMed and journals in the nature, science, or cell families.
Keep only the most relevant papers for summarization.
Retrieve full text selectively.
Use retrieve_paper_pdf for the top papers when the abstract is insufficient, when open-access availability matters, or when methods/details are central to the request.
Cross-reference the internal database.
Use query_experimental_database with gene, transcript, mutation, stop codon, assay type, suppressor tRNA design, or cell system terms extracted from the literature hits.
If a Notion destination is provided, update that page with a dated section. Organize each paper with:
Produce a concise research note. Include:
Write the research note in four short sections:
State the query, date window, and sources used.
List the highest-signal papers with date, URL, and a concise abstract or abstract-derived summary.
Summarize the most relevant matching experimental records, or say explicitly that no relevant matches were found.
Give a brief bottom line and the next recommended checks.