Disease-Drug Landscape Analysis - Map the drug landscape for a disease: OpenTargets disease drugs, FDA indications, and clinical studies. Use this skill for drug discovery tasks involving get associated drugs by target name get drug names by indication get clinical studies info by drug name. Combines 3 tools from 2 SCP server(s).
Discipline: Drug Discovery | Tools Used: 3 | Servers: 2
Map the drug landscape for a disease: OpenTargets disease drugs, FDA indications, and clinical studies.
get_associated_drugs_by_target_name from opentargets-server (streamable-http) - https://scp.intern-ai.org.cn/api/v1/mcp/15/Origene-OpenTargetsget_drug_names_by_indication from fda-drug-server (streamable-http) - https://scp.intern-ai.org.cn/api/v1/mcp/14/Origene-FDADrugget_clinical_studies_info_by_drug_name from fda-drug-server (streamable-http) - https://scp.intern-ai.org.cn/api/v1/mcp/14/Origene-FDADrug{
"target_name": "EGFR",
"indication": "non-small cell lung cancer"
}
Note: Replace
<YOUR_SCP_HUB_API_KEY>with your own SCP Hub API Key. You can obtain one from the SCP Platform.
import asyncio
import json
from mcp import ClientSession
from mcp.client.streamable_http import streamablehttp_client
from mcp.client.sse import sse_client
SERVERS = {
"opentargets-server": "https://scp.intern-ai.org.cn/api/v1/mcp/15/Origene-OpenTargets",
"fda-drug-server": "https://scp.intern-ai.org.cn/api/v1/mcp/14/Origene-FDADrug"
}
async def connect(url, transport_type):
transport = streamablehttp_client(url=url, headers={"SCP-HUB-API-KEY": "<YOUR_SCP_HUB_API_KEY>"})
read, write, _ = await transport.__aenter__()
ctx = ClientSession(read, write)
session = await ctx.__aenter__()
await session.initialize()
return session, ctx, transport
def parse(result):
try:
if hasattr(result, 'content') and result.content:
c = result.content[0]
if hasattr(c, 'text'):
try: return json.loads(c.text)
except: return c.text
return str(result)
except: return str(result)
async def main():
# Connect to required servers
sessions = {}
sessions["opentargets-server"], _, _ = await connect("https://scp.intern-ai.org.cn/api/v1/mcp/15/Origene-OpenTargets", "streamable-http")
sessions["fda-drug-server"], _, _ = await connect("https://scp.intern-ai.org.cn/api/v1/mcp/14/Origene-FDADrug", "streamable-http")
# Execute workflow steps
# Step 1: Get associated drugs from OpenTargets
result_1 = await sessions["opentargets-server"].call_tool("get_associated_drugs_by_target_name", arguments={})
data_1 = parse(result_1)
print(f"Step 1 result: {json.dumps(data_1, indent=2, ensure_ascii=False)[:500]}")
# Step 2: Find drugs by indication in FDA
result_2 = await sessions["fda-drug-server"].call_tool("get_drug_names_by_indication", arguments={})
data_2 = parse(result_2)
print(f"Step 2 result: {json.dumps(data_2, indent=2, ensure_ascii=False)[:500]}")
# Step 3: Get clinical studies for top drug
result_3 = await sessions["fda-drug-server"].call_tool("get_clinical_studies_info_by_drug_name", arguments={})
data_3 = parse(result_3)
print(f"Step 3 result: {json.dumps(data_3, indent=2, ensure_ascii=False)[:500]}")
# Cleanup
print("Workflow complete!")
if __name__ == "__main__":
asyncio.run(main())